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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
ACC rs12749677 chr1:26811614 C/T TFDP3 chrX:132350697-132352376:- 1.02 10.13 6.7E-14 Box Plot
ACC rs12763352 chr10:34018335 A/G GAGE2D chrX:49207160-49214420:+ 0.67 8.27 4.72E-11 Box Plot
ACC rs12765914 chr10:34013507 C/T GAGE2D chrX:49207160-49214420:+ 0.59 7.7 3.86E-10 Box Plot
ACC rs12774712 chr10:34016484 G/T GAGE2D chrX:49207160-49214420:+ 0.67 8.27 4.72E-11 Box Plot
ACC rs12859127 chr13:60796355 C/T PRAMEF16 chr1:13495254-13498260:+ 0.73 8.74 8.63E-12 Box Plot
ACC rs12859138 chr13:60796399 A/C PRAMEF16 chr1:13495254-13498260:+ 0.73 8.74 8.63E-12 Box Plot
ACC rs12874175 chr13:99093498 G/C OR5V1 chr6:29323007-29399744:- 0.61 8.17 6.92E-11 Box Plot
ACC rs12918679 chr16:57660281 G/T PRHOXNB chr13:28552243-28562774:- 0.66 8.24 5.39E-11 Box Plot
ACC rs12945108 chr17:66683745 G/A C2orf57 chr2:232457575-232458994:+ 0.75 7.56 6.38E-10 Box Plot
ACC rs13002113 chr2:195299466 G/C PRHOXNB chr13:28552243-28562774:- 0.81 10.57 1.5E-14 Box Plot
ACC rs13025426 chr2:107374756 T/C PRAMEF16 chr1:13495254-13498260:+ 0.61 7.89 1.88E-10 Box Plot
ACC rs13215427 chr6:46702296 A/C PRHOXNB chr13:28552243-28562774:- 0.67 8.56 1.69E-11 Box Plot
ACC rs13224013 chr7:47178347 G/A DRGX chr10:50572226-50604062:- 0.76 7.9 1.85E-10 Box Plot
ACC rs13227664 chr7:47179139 G/C DRGX chr10:50572226-50604062:- 0.76 7.9 1.85E-10 Box Plot
ACC rs13254260 chr8:68753048 G/A PRHOXNB chr13:28552243-28562774:- 0.61 7.55 6.56E-10 Box Plot